Sequenceserver setup on MAC

sequenceserver
#1

Hello,

I have installed sequenceserver via gem.

$ sudo gem install sequenceserver
$ sudo passenger-install-apache2-module

When I run

$ sequenceserver

it lists BLAST+ programs and databases.

How Do I make search ?

I want to deploy it on apache on MAC Lion. I read docs at www.sequenceserver.com. But still I dont know where the config files are and how can I start webpage that link to sequenceserver.

Any Ideas.

Thank you.

#2

Hi there - please read the docs very carefully.
After it is running you should be able to type http://0.0.0.0:4567/ or http://localhost:4567/ in a browser and see the interface.

cheers
yannick

#3

Hello,

Thank you for reply. I have got error when I edit httpd.conf with …

LoadModule passenger_module /Library/Ruby/Gems/1.8/gems/passenger-3.0.17/ext/apache2/mod_passenger.so
PassengerRoot /Library/Ruby/Gems/1.8/gems/passenger-3.0.17
PassengerRuby /System/Library/Frameworks/Ruby.framework/Versions/1.8/usr/bin/ruby

Where should I put those lines in httpd.conf

When I type http://localhost:80/ it gives list of 3 folders from public folder. (I have changed port to 80 in sequenceserver.conf)

I cant see the BLAST interface.

Any help …

Thank you…