sequenceserver BLAST-ing timeout

sequenceserver
#1

I succesfully installed sequenceserver on ubuntu. I blasted 70 nucleotide sequences against nt or nr database. I got this error message:
"Server didn’t respond
Could be a temporary network issue, or the service might be configured to “time out” long requests.

Please try again later, or report to the admin or SequenceServer Google Group (if you are the admin) if problem persists."
I browsered all over the web without succesfully find out an issue for my problem.
Any solution could be greatfull.
efjjor

#2

First I apologize (I am the admin), I forgot to say that I succesfully did shorter requests (less sequences and less bp/sequence). The resulting xml files worked well in Megan. I may have to find the config file (which one, what directory) to reconfigure the service from “time out” long requests to what (?..).
Thanks first

#3

Are you using SequenceServer behind Apache/Ngingx? The built-in server shouldn’t timeout.

– Priyam

#4

Hi,
Have you solved these timeout problem? I’m facing the same problem… Thank you

#5

I am using the built-in sequenceserver, but I still got this error when I search by a big database such as nt or nr. Searching by small databases is OK. I need to know where the timeout config information is, there are too many file to lookup. I am very excited to meet you here. Please help me.
error: “Could be a temporary network issue, or the service might be configured to “time out” long requests.
Please try again later, or report to the admin or SequenceServer Google Group (if you are the admin) if problem persists.”

在 2015年12月17日星期四 UTC+8下午6:36:58，Fernanda Oliveira写道：

#6

Hei, budy, have you figure out this problem? I am experiencing the same problem as you. Could you help me? Thank you very much!

在 2015年6月11日星期四 UTC+8下午9:47:52，efj…@gmail.com写道：

#7

Are you using Apache or Nginx?

Priyam

#8

I am using Apache in 80 port ,while Sequenceserver are running in 4567 port. Is this the problem?

[

cetusleyla

cetusleyla@gmail.com

](https://maas.mail.163.com/dashi-web-extend/html/proSignature.html?ftlId=1&name=cetusleyla&uid=cetusleyla%40gmail.com&iconUrl=https%3A%2F%2Fmail-online.nosdn.127.net%2Fqiyelogo%2FdefaultAvatar.png&items=["cetusleyla%40gmail.com"])

签名由 网易邮箱大师 定制

On 6/3/2019 18:09，Anurag Priyamanurag08priyam@gmail.com wrote：

#9

By default Apache drops a connection after 60 seconds, which is the reason you are seeing this error. Please change the ’TimeOut’ directive in your Apache configuration file.

https://httpd.apache.org/docs/2.4/mod/core.html#timeout

Priyam

#10

Really appreciate your help!
That problem has been solved by your information.
Thank you again for everything you’ve done.

[

cetusleyla

cetusleyla@gmail.com

](https://maas.mail.163.com/dashi-web-extend/html/proSignature.html?ftlId=1&name=cetusleyla&uid=cetusleyla%40gmail.com&iconUrl=https%3A%2F%2Fmail-online.nosdn.127.net%2Fqiyelogo%2FdefaultAvatar.png&items=["cetusleyla%40gmail.com"])

签名由 网易邮箱大师 定制

On 6/6/2019 18:14，Anurag Priyamanurag08priyam@gmail.com wrote：