Anyone running this software in a cluster setup? Got 8 nodes from my old HPC cluster that I have been requested to use but before I configuring them individually for Sequenceserver I figured I’ll check if this have been done before?
Thanks for your community spirit. I’m not aware of anyone using seqserv with a cluster before, but I don’t see why it couldn’t be done.
Not sure if this recent thing might be of use?
I don’t know about use on a real cluster. Anurag managed to set things up to run blast calculations on a machine that is different from the web machine using the following type of wrapper (eg. what follows is a “fake” blastp binary):
ssh firstname.lastname@example.org /path/to/ncbi-blast-2.2.27+/bin/blastp "$@"
You can probably use something similar to send blast commands to a queue.